Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015857975.1_cds_XP_016513642.1_26164
CDS Infomation

[gene=LOC107830554] [db_xref=GeneID:107830554] [protein=elongation factor 1-alpha-like] [protein_id=XP_016513642.1] [location=join(46854..47315,47395..48276)] [gbkey=CDS]
Sequence

ATGGGTAAAGAGAAGGTTCACATCAACATTGTGGTCATTGGCCACGTCGACTCTGGAAAG
TCGACCACCACTGGCCATTTGATCTACAAGCTTGGTGGTATTGACAAGCGTGTTATTGAG
AGGTTCGAGAAGGAAGCTGCTGAGATGAACAAGAGGTCATTCAAGTATGCCTGGGTGCTT
GACAAGCTTAAGGCTGAACGTGAGCGTGGTATCACCATTGATATTGCCTTGTGGAAGTTT
GAGACCACTAAGTACTACTGCACTGTGATTGATGCCCCCGGACACAGGGACTTTATCAAG
AACATGATCACTGGTACTTCCCAGGCTGATTGTGCTGTTCTTATTATTGACTCCACCACT
GGTGGTTTTGAAGCTGGTATTTCCAAGGATGGTCAGACCCGTGAGCACGCATTGCTTGCT
TTCACCCTTGGTGTCAAGCAAATGATTTGCTGCTGCAACAAGATGGATGCTACCACCCCA
AAGTACTCCAAGGCTAGGTATGATGAAATTGTGAAGGAAGTTTCTTCCTACCTCAAGAAG
GTTGGTTACAACCCTGACAAGATTCCCTTTGTCCCCATCTCTGGTTTCGAGGGGGACAAT
ATGATTGAGAGGTCTACCAACCTTGACTGGTACAAGGGGCCAACCCTCCTTGAGGCTCTT
GACCAGATTAATGAGCCCAAGAGGCCCACAGACAAACCCCTACGTCTTCCACTTCAGGAC
GTTTACAAGATTGGTGGTATTGGTACTGTCCCTGTTGGTCGTGTTGAAACAGGTGTCCTC
AAGCCTGGTATGCTTGTGACCTTTGGGCCTACTGGTCTGACAACTGAAGTCAAGTCTGTA
GAGATGCACCACGAAGCTCTCCAGGAGGCACTCCCTGGTGACAATGTTGGGTTCAATGTT
AAGAATGTTGCTGTTAAGGATCTCAAGCGTGGTTATGTTGCCTCAAACTCCAAGGATGAC
CCAGCCAAAGGGGCTGCCAGTTTCACCTCCCAGGTCATCATCATGAACCATCCTGGTCAG
ATCGGAAATGGATATGCACCAGTTCTCGACTGCCACACTTCCCACATTGCTGTCAAGTTC
GCTGAGATCTTGACCAAGATTGACAGACGTTCTGGTAAGGAACTTGAGAAGGAGCCTAAG
TTCTTGAAGAATGGTGATGCTGGTATGGTTAAGATGATTCCTACCAAGCCTATGGTTGTT
GAGACCTTCTCCGAGTACCCACCATTGGGTCGTTTCGCTGTGAGGGACATGCGTCAGACT
GTTGCTGTTGGTGTCATCAAGAATGTCGACAAGAAGGACCCAACCGGTGCCAAGGTCACC
AAAGCTGCTCAGAAGAAGAAGTGA

Peptide Sequence

PEP ID

XP_016513642.1
PEP Infomation

PREDICTED: elongation factor 1-alpha-like [Nicotiana tabacum]
Sequence

MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQD
VYKIGGIGTVPVGRVETGVLKPGMLVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGYVASNSKDDPAKGAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AEILTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKNVDKKDPTGAKVTKAAQKKK

Transcript Sequence

Gene sequence data has not been registered.